Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC110963483Parvalbumin 5; Belongs to the parvalbumin family. (185 aa)    
Predicted Functional Partners:
LOC110964456
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.749
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.749
myo3b
Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.741
myo3a
Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.741
LOC110967170
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.741
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.694
nme9
NME/NM23 family member 8; Belongs to the NDK family.
   
 
 0.677
ENSAPOP00000032746
Uncharacterized protein.
   
 0.640
ENSAPOP00000032748
WD_REPEATS_REGION domain-containing protein.
   
 0.640
ENSAPOP00000006159
Uncharacterized protein.
    
 
 0.624
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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