Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
taf1cWu:fj64h06. (815 aa)    
Predicted Functional Partners:
taf1b
TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B.
    
 0.956
suox
Sulfite oxidase.
  
  0.867
tbpl2
TATA box binding protein like 2.
   
 0.851
ENSAPOP00000017354
Uncharacterized protein.
   
 0.851
tbp
TATA box binding protein.
   
 0.851
rrn3
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.839
LOC110949866
Germ cell nuclear acidic peptidase.
    
 0.804
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
  0.801
kars1
Lysine--tRNA ligase.
   
 0.732
fbxw12
Si:ch73-142c19.1.
    
 0.719
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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