Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110954019Ig-like domain-containing protein. (623 aa)    
Predicted Functional Partners:
LOC110952577
Nerve growth factor receptor a (TNFR superfamily, member 16).
    
 0.930
LOC110950631
LRRNT domain-containing protein.
   
 0.794
LOC110962570
Oligodendrocyte myelin glycoprotein b.
   
 0.794
ENSAPOP00000024610
Uncharacterized protein.
    
  0.772
ENSAPOP00000028898
Uncharacterized protein.
    
  0.772
rtn4r
Reticulon 4 receptor.
   
 
 0.730
rtn4
Reticulon.
    
 0.713
mag
Myelin associated glycoprotein.
    
 0.650
LOC110970596
Reticulon.
    
 0.646
ENSAPOP00000009218
Reticulon.
    
 0.631
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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