Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL1Elongation factor like GTPase 1. (1132 aa)    
Predicted Functional Partners:
sbds
SBDS ribosome maturation factor.
  
 
 0.986
eif6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
   
 
 0.963
eef1g
Eukaryotic translation elongation factor 1 gamma.
   
 
 0.947
rps18
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 0.940
rpl11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 0.940
rps11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 0.940
rps15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.940
rpl4
Ribosomal protein L4.
  
 0.939
rpl23a
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 0.937
mrpl12
Mitochondrial ribosomal protein L12.
  
 
 0.932
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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