Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ENSAPOP00000005197PDZ domain-containing protein. (109 aa)    
Predicted Functional Partners:
actr8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
 0.726
actr5
Actin related protein 5; Belongs to the actin family.
    
 0.721
actl6a
Actin-like 6A; Belongs to the actin family.
   
 0.714
ruvbl1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.708
ino80c
INO80 complex subunit C.
    
 0.707
polr1e
RNA polymerase I subunit E.
    
 0.645
ercc3
Excision repair cross-complementation group 3.
    
 0.644
becn1
Beclin 1, autophagy related.
    
 0.634
LOC110958985
TYR_PHOSPHATASE_2 domain-containing protein.
     
 0.631
supt16h
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 0.631
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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