STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110971453Neurogenin 1. (193 aa)    
Predicted Functional Partners:
hes1
Hairy-related 6.
    
 0.872
LOC110967214
Hairy-related 9.
    
 0.819
LOC110970525
Hairy-related 12.
   
 0.708
ENSAPOP00000005836
Uncharacterized protein.
    
 0.704
LOC110964851
Uncharacterized protein.
    
 0.701
cdk5r1
Cyclin-dependent kinase 5 activator.
   
  
 0.655
rora
RAR-related orphan receptor A, paralog a.
   
  
 0.640
LOC110950071
Insulinoma-associated 1b.
   
 0.634
INSM2
INSM transcriptional repressor 2.
   
 0.634
insm1
Insulinoma-associated 1a.
   
 0.634
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.