Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC110969503Si:dkey-69o16.5. (240 aa)    
Predicted Functional Partners:
dusp28
Dual specificity phosphatase 28.
      
 0.798
sft2d3
Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.
      
 0.678
zc3h15
Zinc finger CCCH-type containing 15.
      
 0.670
LOC110963065
C1q domain-containing protein.
      
 0.670
mettl22
Methyltransferase like 22.
      
 0.657
WDR33
WD repeat domain 33.
     
 0.638
LOC110964750
Zgc:172121; Involved in the regulation of homocysteine metabolism.
    
   0.637
proc
Uncharacterized protein.
      
 0.588
clpp
ATP-dependent Clp protease proteolytic subunit.
     
 0.570
nfs1
NFS1 cysteine desulfurase.
      
 0.565
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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