STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kctd12Potassium channel tetramerisation domain containing 12.1. (247 aa)    
Predicted Functional Partners:
ENSAPOP00000004485
SRY-box transcription factor 1a.
    
 
 0.654
LOC110954893
LIM domain containing preferred translocation partner in lipoma.
      
 0.642
LOC110955142
Forkhead box J1a.
      
 0.629
LOC110960410
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.619
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.619
LOC110971866
Southpaw.
      
 0.613
tcf7l2
Transcription factor 7 like 2.
      
 0.613
LOC110956585
SIX homeobox 7.
      
 0.613
foxd3
Forkhead box D3.
      
 0.613
pitx2
Homeobox protein.
      
 0.613
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.