Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000005350UBA_e1_C domain-containing protein. (61 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
   
 0.959
ENSAPOP00000003675
Ubiquitin-like domain-containing protein.
   
 0.947
ENSAPOP00000007183
UBIQUITIN_CONJUGAT_2 domain-containing protein.
  
 0.940
birc6
Baculoviral IAP repeat containing 6.
  
 0.940
LOC110955007
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
  
 0.929
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.925
ube2z
Ubiquitin-conjugating enzyme E2Z.
  
 0.921
ube2c
Ubiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.917
ube2w
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.914
LOC110954939
Ubiquitin-conjugating enzyme E2S; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.906
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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