STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110964677Activating transcription factor 4b. (435 aa)    
Predicted Functional Partners:
ddit3
DNA-damage-inducible transcript 3.
   
 0.959
LOC110946580
CCAAT enhancer binding protein beta.
   
 0.957
ENSAPOP00000026077
CCAAT enhancer binding protein gamma.
   
 0.954
eif2s1
Eukaryotic translation initiation factor 2, subunit 1 alpha b.
     
 0.934
eif2ak3
Eukaryotic translation initiation factor 2-alpha kinase 3.
     
 0.934
LOC110970773
Ribosomal protein S6 kinase.
     
 0.896
LOC110958575
Ribosomal protein S6 kinase.
     
 0.896
LOC110952915
Ribosomal protein S6 kinase.
     
 0.896
LOC110962211
MAPK interacting serine/threonine kinase 1; Belongs to the protein kinase superfamily.
     
 0.893
LOC110958411
Ribosomal protein S6 kinase.
     
 0.893
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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