Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110964677Activating transcription factor 4b. (435 aa)    
Predicted Functional Partners:
ddit3
DNA-damage-inducible transcript 3.
   
 0.977
eif2s1
Eukaryotic translation initiation factor 2, subunit 1 alpha b.
    
 0.960
atf3
Activating transcription factor 3.
    
 0.956
creb1
Uncharacterized protein.
    
 0.955
LOC110966635
Uncharacterized protein.
    
 0.955
LOC110970400
BZIP domain-containing protein.
    
 0.955
LOC110952860
cAMP responsive element binding protein 1.
    
 0.949
ENSAPOP00000026077
CCAAT enhancer binding protein gamma.
   
 0.945
LOC110965885
Activating transcription factor 4a.
  
  
 
0.944
LOC110957734
Activating transcription factor 1.
    
 0.937
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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