ENSAPOP00000005366 protein (Acanthochromis polyacanthus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Gene Fusion

Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSAPOP00000005366

Uncharacterized protein. (490 aa)

Predicted Functional Partners:

ush1c

0.961

LOC110954205

0.948

LOC110964147

0.936

LOC110958640

0.936

pcdh15

0.936

fjx1

0.820

LOC110957012

0.711

ctnnb1

0.711

ENSAPOP00000026172

0.711

LOC110960392

0.711

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPOP00000005366	ENSAPOP00000026172	ENSAPOP00000005366	ENSAPOP00000026172	Uncharacterized protein.	Uncharacterized protein.	0.711
ENSAPOP00000005366	LOC110954205	ENSAPOP00000005366	ENSAPOP00000019606	Uncharacterized protein.	Uncharacterized protein.	0.948
ENSAPOP00000005366	LOC110957012	ENSAPOP00000005366	ENSAPOP00000004419	Uncharacterized protein.	Uncharacterized protein.	0.711
ENSAPOP00000005366	LOC110958640	ENSAPOP00000005366	ENSAPOP00000002819	Uncharacterized protein.	Uncharacterized protein.	0.936
ENSAPOP00000005366	LOC110960392	ENSAPOP00000005366	ENSAPOP00000026718	Uncharacterized protein.	Junction plakoglobin a.	0.711
ENSAPOP00000005366	LOC110964147	ENSAPOP00000005366	ENSAPOP00000001165	Uncharacterized protein.	Uncharacterized protein.	0.936
ENSAPOP00000005366	ctnnb1	ENSAPOP00000005366	ENSAPOP00000008452	Uncharacterized protein.	Catenin (cadherin-associated protein), beta 1.	0.711
ENSAPOP00000005366	fjx1	ENSAPOP00000005366	ENSAPOP00000019935	Uncharacterized protein.	Four-jointed box kinase 1.	0.820
ENSAPOP00000005366	pcdh15	ENSAPOP00000005366	ENSAPOP00000005114	Uncharacterized protein.	Protocadherin-related 15a.	0.936
ENSAPOP00000005366	ush1c	ENSAPOP00000005366	ENSAPOP00000017986	Uncharacterized protein.	Usher syndrome 1C.	0.961
ENSAPOP00000026172	ENSAPOP00000005366	ENSAPOP00000026172	ENSAPOP00000005366	Uncharacterized protein.	Uncharacterized protein.	0.711
ENSAPOP00000026172	LOC110954205	ENSAPOP00000026172	ENSAPOP00000019606	Uncharacterized protein.	Uncharacterized protein.	0.597
ENSAPOP00000026172	LOC110958640	ENSAPOP00000026172	ENSAPOP00000002819	Uncharacterized protein.	Uncharacterized protein.	0.597
ENSAPOP00000026172	LOC110960392	ENSAPOP00000026172	ENSAPOP00000026718	Uncharacterized protein.	Junction plakoglobin a.	0.873
ENSAPOP00000026172	LOC110964147	ENSAPOP00000026172	ENSAPOP00000001165	Uncharacterized protein.	Uncharacterized protein.	0.597
ENSAPOP00000026172	ctnnb1	ENSAPOP00000026172	ENSAPOP00000008452	Uncharacterized protein.	Catenin (cadherin-associated protein), beta 1.	0.991
ENSAPOP00000026172	pcdh15	ENSAPOP00000026172	ENSAPOP00000005114	Uncharacterized protein.	Protocadherin-related 15a.	0.597
LOC110954205	ENSAPOP00000005366	ENSAPOP00000019606	ENSAPOP00000005366	Uncharacterized protein.	Uncharacterized protein.	0.948
LOC110954205	ENSAPOP00000026172	ENSAPOP00000019606	ENSAPOP00000026172	Uncharacterized protein.	Uncharacterized protein.	0.597
LOC110954205	LOC110957012	ENSAPOP00000019606	ENSAPOP00000004419	Uncharacterized protein.	Uncharacterized protein.	0.730