STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110961255Cryptochrome circadian regulator 5. (522 aa)    
Predicted Functional Partners:
per1
Period circadian clock 1b.
   
 0.887
timeless
Timeless circadian clock.
    
 0.885
LOC110950458
PAS domain-containing protein.
   
 0.846
LOC110957224
Period circadian clock 2.
   
 0.846
LOC110958256
Period circadian clock 3.
   
 0.846
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
   
 0.845
LOC110955530
Aryl hydrocarbon receptor nuclear translocator-like 2.
   
 0.845
LOC110967463
Neuronal PAS domain protein 2.
    
 0.845
ENSAPOP00000002624
Uncharacterized protein.
   
 0.839
arntl
Aryl hydrocarbon receptor nuclear translocator-like 1a.
   
 0.839
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.