Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110966420Nuclear protein 1b. (74 aa)    
Predicted Functional Partners:
ptma
Prothymosin alpha b.
    
   0.623
LOC110968897
Proteasome 26S subunit, non-ATPase 4a.
    
   0.578
LOC110952467
Proteasome 26S subunit, non-ATPase 4b.
    
   0.578
chac1
Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
      
 0.536
svip
Si:ch73-147o17.1.
      
 0.491
LOC110961166
Interleukin 17a/f1.
      
 0.476
enkur
Enkurin, TRPC channel interacting protein.
      
 0.470
stx18
Syntaxin 18.
    
   0.441
naca
Nascent polypeptide associated complex subunit alpha.
    
   0.410
LOC110952964
NAC alpha domain containing.
    
   0.410
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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