Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110962283Uncharacterized protein. (461 aa)    
Predicted Functional Partners:
ENSAPOP00000020363
Uncharacterized protein.
 
     0.902
LOC110956361
Tumor suppressor candidate 3.
    
   0.764
LOC110969224
Magnesium transporter 1.
    
   0.764
PTPRD
Uncharacterized protein.
   
 0.697
PTPRD-2
Protein tyrosine phosphatase receptor type D.
   
 0.697
LOC110957580
Protein tyrosine phosphatase receptor type Fb.
   
 0.687
LOC110949335
Protein tyrosine phosphatase receptor type Fa.
   
 0.687
LOC110948953
Protein tyrosine phosphatase receptor type Sa.
   
 0.687
LOC110950310
Protein tyrosine phosphatase receptor type Sa.
   
 0.687
LOC110964442
SLIT and NTRK-like family, member 2.
   
 0.679
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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