STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110952233BHLH domain-containing protein. (123 aa)    
Predicted Functional Partners:
ENSAPOP00000004334
Uncharacterized protein.
    
 0.731
LOC110967144
Transcription factor 3a.
    
 0.731
LOC110949229
Transcription factor 3b.
    
 0.731
LOC110950375
BHLH domain-containing protein.
    
 0.731
ENSAPOP00000030307
Uncharacterized protein.
    
 0.731
tcf12
Transcription factor 12.
    
 0.731
gsc
Goosecoid.
    
 0.692
LOC110949969
Orthopedia homeobox b.
   
 0.603
OTP
Orthopedia homeobox.
   
 0.603
ldb1
LIM-domain binding 1b.
    
 0.601
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.