Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC110956985CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2. (261 aa)    
Predicted Functional Partners:
cdca3
Si:ch211-69g19.2.
    
   0.743
LOC110948228
Myelin basic protein b.
    
   0.743
gtf2f1
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
 0.710
LOC110955897
RE1-silencing transcription factor.
    
 
 0.683
polr2g
Polymerase (RNA) II (DNA directed) polypeptide G-like.
    
 0.665
polr2d
Polymerase (RNA) II (DNA directed) polypeptide D.
    
 0.664
LOC110965965
Zgc:123305.
    
 0.652
LOC110968287
Lipin 2.
    
 0.652
LOC110961567
Lipin 1.
    
 0.652
LPIN2
Lipin 2.
    
 0.652
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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