LOC110970052 protein (Acanthochromis polyacanthus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC110970052

SAC domain-containing protein. (586 aa)

Predicted Functional Partners:

LOC110960528

0.966

ENSAPOP00000011549

0.965

ENSAPOP00000011614

0.965

ocrl

0.960

inpp5b

0.958

synj1

0.950

pikfyve

0.933

LOC110970071

0.924

LOC110950983

0.924

ENSAPOP00000023549

0.923

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPOP00000011549	ENSAPOP00000011614	ENSAPOP00000011549	ENSAPOP00000011614	Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.917
ENSAPOP00000011549	ENSAPOP00000023549	ENSAPOP00000011549	ENSAPOP00000023549	Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.920
ENSAPOP00000011549	LOC110950983	ENSAPOP00000011549	ENSAPOP00000029384	Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family.	Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.	0.939
ENSAPOP00000011549	LOC110970052	ENSAPOP00000011549	ENSAPOP00000005503	Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family.	SAC domain-containing protein.	0.965
ENSAPOP00000011549	LOC110970071	ENSAPOP00000011549	ENSAPOP00000024109	Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.939
ENSAPOP00000011549	inpp5b	ENSAPOP00000011549	ENSAPOP00000034801	Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family.	Inositol polyphosphate-5-phosphatase B.	0.890
ENSAPOP00000011549	ocrl	ENSAPOP00000011549	ENSAPOP00000009840	Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family.	OCRL inositol polyphosphate-5-phosphatase.	0.890
ENSAPOP00000011549	pikfyve	ENSAPOP00000011549	ENSAPOP00000025362	Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family.	Phosphoinositide kinase, FYVE finger containing.	0.898
ENSAPOP00000011549	synj1	ENSAPOP00000011549	ENSAPOP00000021921	Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family.	Synaptojanin 1.	0.900
ENSAPOP00000011614	ENSAPOP00000011549	ENSAPOP00000011614	ENSAPOP00000011549	Uncharacterized protein.	Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family.	0.917
ENSAPOP00000011614	LOC110950983	ENSAPOP00000011614	ENSAPOP00000029384	Uncharacterized protein.	Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.	0.939
ENSAPOP00000011614	LOC110960528	ENSAPOP00000011614	ENSAPOP00000023609	Uncharacterized protein.	Phosphatidylinositol 4-kinase, catalytic, alpha b; Belongs to the PI3/PI4-kinase family.	0.926
ENSAPOP00000011614	LOC110970052	ENSAPOP00000011614	ENSAPOP00000005503	Uncharacterized protein.	SAC domain-containing protein.	0.965
ENSAPOP00000011614	LOC110970071	ENSAPOP00000011614	ENSAPOP00000024109	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.939
ENSAPOP00000011614	inpp5b	ENSAPOP00000011614	ENSAPOP00000034801	Uncharacterized protein.	Inositol polyphosphate-5-phosphatase B.	0.890
ENSAPOP00000011614	ocrl	ENSAPOP00000011614	ENSAPOP00000009840	Uncharacterized protein.	OCRL inositol polyphosphate-5-phosphatase.	0.890
ENSAPOP00000011614	pikfyve	ENSAPOP00000011614	ENSAPOP00000025362	Uncharacterized protein.	Phosphoinositide kinase, FYVE finger containing.	0.898
ENSAPOP00000011614	synj1	ENSAPOP00000011614	ENSAPOP00000021921	Uncharacterized protein.	Synaptojanin 1.	0.900
ENSAPOP00000023549	ENSAPOP00000011549	ENSAPOP00000023549	ENSAPOP00000011549	Uncharacterized protein.	Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family.	0.920
ENSAPOP00000023549	LOC110950983	ENSAPOP00000023549	ENSAPOP00000029384	Uncharacterized protein.	Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.	0.903