STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRPHPeripherin; Belongs to the intermediate filament family. (498 aa)    
Predicted Functional Partners:
ina
Internexin neuronal intermediate filament protein, alpha b; Belongs to the intermediate filament family.
  
 
 
0.782
LOC110950504
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
 
0.777
LOC110967550
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
 
0.777
NEFL
Neurofilament light; Belongs to the intermediate filament family.
    
 
0.777
nefm
Neurofilament, medium polypeptide a; Belongs to the intermediate filament family.
    
 
0.777
nefh
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
 
0.750
LOC110953683
Uncharacterized protein.
    
 
0.653
ENSAPOP00000004205
Uncharacterized protein.
    
  0.593
LOC110968208
Si:dkey-19b23.12.
    
  0.593
ENSAPOP00000005675
Uncharacterized protein.
    
  0.593
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.