STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIP10Thyroid hormone receptor interactor 10b. (506 aa)    
Predicted Functional Partners:
ENSAPOP00000030863
Intersectin 2a.
   
 0.908
LOC110950796
Intersectin 2b.
   
 0.908
ENSAPOP00000024705
Ras homolog family member H.
    
 0.861
rhoq
Ras homolog family member Q.
    
 0.861
ENSAPOP00000016241
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
   0.851
was
WASP actin nucleation promoting factor a.
   
 0.822
ENSAPOP00000018232
WH1 domain-containing protein.
   
 0.822
wasl
WASP like actin nucleation promoting factor b.
   
 0.822
itsn1
Intersectin 1 (SH3 domain protein).
   
 0.814
CDC42
Cell division cycle 42.
    
 0.793
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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