LOC110966408 protein (Acanthochromis polyacanthus)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LOC110966408

Uncharacterized protein. (203 aa)

Predicted Functional Partners:

ENSAPOP00000008943

0.678

LOC110965207

0.647

scpep1

0.613

LOC110946946

0.613

tjp3

0.495

ENSAPOP00000009613

0.495

vti1b

0.495

vti1a

0.495

CLDN20-2

0.495

CLDN14

0.495

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLDN14	CLDN20-2	ENSAPOP00000030443	ENSAPOP00000029520	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.873
CLDN14	ENSAPOP00000009613	ENSAPOP00000030443	ENSAPOP00000009613	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Uncharacterized protein.	0.873
CLDN14	LOC110966408	ENSAPOP00000030443	ENSAPOP00000005566	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Uncharacterized protein.	0.495
CLDN14	tjp3	ENSAPOP00000030443	ENSAPOP00000001705	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Tight junction protein 3; Belongs to the MAGUK family.	0.886
CLDN20-2	CLDN14	ENSAPOP00000029520	ENSAPOP00000030443	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.873
CLDN20-2	ENSAPOP00000009613	ENSAPOP00000029520	ENSAPOP00000009613	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Uncharacterized protein.	0.873
CLDN20-2	LOC110966408	ENSAPOP00000029520	ENSAPOP00000005566	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Uncharacterized protein.	0.495
CLDN20-2	tjp3	ENSAPOP00000029520	ENSAPOP00000001705	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Tight junction protein 3; Belongs to the MAGUK family.	0.895
ENSAPOP00000008943	LOC110965207	ENSAPOP00000008943	ENSAPOP00000007620	Sorting nexin 22.	PALM2-AKAP2 fusion.	0.573
ENSAPOP00000008943	LOC110966408	ENSAPOP00000008943	ENSAPOP00000005566	Sorting nexin 22.	Uncharacterized protein.	0.678
ENSAPOP00000008943	vti1a	ENSAPOP00000008943	ENSAPOP00000016469	Sorting nexin 22.	Vesicle transport through interaction with t-SNAREs 1A.	0.481
ENSAPOP00000008943	vti1b	ENSAPOP00000008943	ENSAPOP00000014886	Sorting nexin 22.	Vesicle transport through interaction with t-SNAREs 1B.	0.481
ENSAPOP00000009613	CLDN14	ENSAPOP00000009613	ENSAPOP00000030443	Uncharacterized protein.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.873
ENSAPOP00000009613	CLDN20-2	ENSAPOP00000009613	ENSAPOP00000029520	Uncharacterized protein.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.873
ENSAPOP00000009613	LOC110966408	ENSAPOP00000009613	ENSAPOP00000005566	Uncharacterized protein.	Uncharacterized protein.	0.495
ENSAPOP00000009613	tjp3	ENSAPOP00000009613	ENSAPOP00000001705	Uncharacterized protein.	Tight junction protein 3; Belongs to the MAGUK family.	0.873
LOC110946946	LOC110966408	ENSAPOP00000027977	ENSAPOP00000005566	Uncharacterized protein; Belongs to the peptidase S10 family.	Uncharacterized protein.	0.613
LOC110946946	scpep1	ENSAPOP00000027977	ENSAPOP00000024984	Uncharacterized protein; Belongs to the peptidase S10 family.	Carboxypeptidase; Belongs to the peptidase S10 family.	0.929
LOC110965207	ENSAPOP00000008943	ENSAPOP00000007620	ENSAPOP00000008943	PALM2-AKAP2 fusion.	Sorting nexin 22.	0.573
LOC110965207	LOC110966408	ENSAPOP00000007620	ENSAPOP00000005566	PALM2-AKAP2 fusion.	Uncharacterized protein.	0.647