Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000005648BICD family like cargo adaptor 1. (542 aa)    
Predicted Functional Partners:
LOC110948788
BICD family like cargo adaptor 2.
     
 0.884
LOC110955815
Si:ch211-235m3.5.
     
 0.879
LOC110961020
Actin related protein 1, centractin.
    
 
 0.855
ccdc96
DUF4201 domain-containing protein.
    
 0.727
HOOK3
Hook microtubule tethering protein 3.
    
 
 0.707
coq5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).
      
 0.684
ccdc113
Coiled-coil domain containing 113.
    
 
 0.680
rnf10
Ring finger protein 10.
      
 0.679
ccdc125
Uncharacterized protein.
      
 0.673
ccdc92
Coiled-coil domain containing 92.
      
 0.650
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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