STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000005652Uncharacterized protein. (459 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2.
   
 0.842
rhobtb3
Si:dkey-6b12.5.
   
 0.814
RND1
Rho family GTPase 1.
   
 0.814
LOC110959317
Rho family GTPase 2.
   
 0.814
LOC110958078
Ras homolog family member Ca.
   
 0.814
LOC110958602
Rho family GTPase 1b.
   
 0.814
ENSAPOP00000005758
Ras homolog gene family, member Gd.
   
 0.814
CDC42
Cell division cycle 42.
   
 0.814
rhobtb2
Rho related BTB domain containing 2a.
   
 0.814
LOC110970533
Uncharacterized protein.
   
 0.814
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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