STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
daoD-amino-acid oxidase, tandem duplicate 2. (345 aa)    
Predicted Functional Partners:
sardh
Sarcosine dehydrogenase.
  
 0.974
LOC110970219
Malate synthase-like.
  
 
 0.965
pdpr
Pyruvate dehydrogenase phosphatase regulatory subunit.
  
 0.955
dmgdh
Dimethylglycine dehydrogenase.
  
 0.954
agxt
Serine--pyruvate aminotransferase.
  
 
 0.943
LOC110957425
Serine--pyruvate aminotransferase.
  
 
 0.943
agxt2
Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.937
LOC110957501
Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.937
l3hypdh
Trans-L-3-hydroxyproline dehydratase.
    
 0.933
gldc
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.928
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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