Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSAPOP00000005803Rho GTPase activating protein 5. (1476 aa)    
Predicted Functional Partners:
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
   
 0.940
LOC110949650
Uncharacterized protein.
    
 0.929
LOC110958078
Ras homolog family member Ca.
    
 0.924
LOC110964518
Uncharacterized protein.
    
 0.924
LOC110959450
Uncharacterized protein.
    
 0.924
LOC110958145
Uncharacterized protein.
    
 0.924
LOC110951080
Ras homolog gene family, member Ab.
    
 0.924
LOC110958739
Tyrosine-protein kinase.
    
 0.906
LOC110948328
Tyrosine-protein kinase.
    
 0.906
RHOB
Ras homolog family member B.
    
 0.898
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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