STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110968198Myosin IG; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (982 aa)    
Predicted Functional Partners:
LOC110962298
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.755
calm1
Calmodulin 1.
    
 0.755
calm3
Calmodulin 3.
    
 0.755
calm2
Calmodulin 2.
    
 0.755
baz1b
Bromodomain adjacent to zinc finger domain, 1B.
    
  0.735
LOC110962034
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
    
 0.735
polr1e
RNA polymerase I subunit E.
    
  0.702
ENSAPOP00000031421
Bromodomain adjacent to zinc finger domain, 1A.
    
  0.684
polr1b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.666
actr10
Actin related protein 10; Belongs to the actin family.
    
 0.642
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.