Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110955815Si:ch211-235m3.5. (539 aa)    
Predicted Functional Partners:
ENSAPOP00000005648
BICD family like cargo adaptor 1.
     
 0.879
LOC110948788
BICD family like cargo adaptor 2.
     
  0.873
LOC110945857
Zgc:162200.
      
 0.803
LOC110967754
Uncharacterized protein.
      
 0.663
bicd1
Bicaudal D homolog 1a.
      
 0.663
nme9
NME/NM23 family member 8; Belongs to the NDK family.
   
 0.629
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.559
mst1r
Macrophage stimulating 1 receptor b.
    
  0.559
LOC110972771
Uncharacterized protein.
    
  0.559
ENSAPOP00000006159
Uncharacterized protein.
    
  0.538
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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