Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000005885Uncharacterized protein. (447 aa)    
Predicted Functional Partners:
ENSAPOP00000004033
PUFD domain-containing protein.
     
  0.865
ENSAPOP00000027012
Uncharacterized protein.
     
  0.865
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.861
PCGF3
Polycomb group ring finger 3.
    
 
 0.855
usp7
Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family.
    
 
 0.854
pcgf1
Polycomb group ring finger 1.
    
 
 0.773
pcgf6
Polycomb group ring finger 6.
    
 
 0.773
bcl6
BCL6A transcription repressor a.
    
 
 0.768
RING1
Ring finger protein 1.
    
 
 0.766
rnf2
Ring finger protein 2.
    
 
 0.766
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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