Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
traf3TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (595 aa)    
Predicted Functional Partners:
LOC110967018
Uncharacterized protein.
    
 0.992
tank
TBD domain-containing protein.
    
 0.991
LOC110948316
CD40 molecule, TNF receptor superfamily member 5.
   
 0.989
LOC110958220
Mitogen-activated protein kinase kinase kinase 14a.
    
 0.989
tbk1
TANK-binding kinase 1.
   
 0.987
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.987
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.984
myd88
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
    
 0.984
LOC110956530
TRIF-NTD domain-containing protein.
    
 0.983
LOC110966239
Uncharacterized protein.
    
 0.981
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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