Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110963444CXXC finger protein 5b. (270 aa)    
Predicted Functional Partners:
LOC110970083
Uncharacterized protein.
    
 0.772
ENSAPOP00000004210
DIX domain-containing protein.
    
 0.772
dvl1
Dishevelled segment polarity protein 1a.
    
 0.772
dvl3
Dishevelled segment polarity protein 3a.
    
 0.772
dvl2
Dishevelled segment polarity protein 2.
    
 0.772
LOC110963885
Tet methylcytosine dioxygenase 3.
    
 0.759
tet2
Tet methylcytosine dioxygenase 2.
    
 0.759
LOC110948525
Tet methylcytosine dioxygenase 1.
    
 0.759
cxxc5
CXXC finger protein 5a.
     
  0.716
LOC110947966
CXXC-type domain-containing protein.
     
  0.716
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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