STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000005977PDZ and pleckstrin homology domains 1. (143 aa)    
Predicted Functional Partners:
ENSAPOP00000030983
Uncharacterized protein.
    
 0.732
ift172
Intraflagellar transport 172.
    
 0.728
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.727
cluap1
Clusterin associated protein 1.
    
 0.704
LOC110951928
Uncharacterized protein.
   
 0.701
LOC110949257
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
   
 0.701
LOC110963603
Par-6 family cell polarity regulator alpha.
    
 0.682
pard6g
Par-6 family cell polarity regulator gamma b.
    
 0.682
pard6b
Par-6 partitioning defective 6 homolog beta (C. elegans).
    
 0.682
ift81
Intraflagellar transport 81 homolog.
    
 0.624
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.