STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110963441Zgc:110843. (149 aa)    
Predicted Functional Partners:
ddb1
Damage-specific DNA binding protein 1.
    
 
 0.916
LOC110971589
DET1 and DDB1 associated 1.
    
 
 0.754
DDA1
DET1 and DDB1 associated 1.
    
 
 0.754
cisd3
Uncharacterized protein.
   
  
 0.654
lemd3
LEM domain containing 3.
    
 
 0.608
ENSAPOP00000008697
RNA binding motif protein 39b.
    
 
 0.608
ENSAPOP00000026819
Uncharacterized protein.
    
 
 0.608
LOC110966115
Uncharacterized protein.
    
 
 0.608
LOC110950635
Uncharacterized protein.
   
  
 0.592
ENSAPOP00000011322
NADH:ubiquinone oxidoreductase subunit S5.
   
 
 0.574
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.