Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rcc1lRCC1 like. (451 aa)    
Predicted Functional Partners:
ENSAPOP00000016736
NDK domain-containing protein.
   
 
 0.980
mterf3
Mitochondrial transcription termination factor 3.
    
  0.945
LOC110946725
TruB pseudouridine (psi) synthase family member 2.
   
 0.940
LOC110947893
TruB_N domain-containing protein.
   
 0.940
LOC110947891
TruB_N domain-containing protein.
   
 0.940
LOC110951087
RNA pseudouridine synthase D4.
    
 0.917
pde6d
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...]
    
 
 0.890
pla2g6
Phospholipase A2, group VI (cytosolic, calcium-independent).
   
   0.845
ngrn
Neugrin, neurite outgrowth associated.
    
 0.817
fastkd2
FAST kinase domains 2.
    
 0.789
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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