STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110952862Matrix metallopeptidase 30. (482 aa)    
Predicted Functional Partners:
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.856
LOC110962342
TIMP metallopeptidase inhibitor 2b.
   
 0.832
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.832
LOC110966739
Matrix metallopeptidase 14a (membrane-inserted).
  
 
0.701
mmp9
Matrix metallopeptidase 9.
   
0.694
timp4
TIMP metallopeptidase inhibitor 4, tandem duplicate 1.
    
 0.694
LOC110952174
Heparin-binding EGF-like growth factor a.
    
  0.662
LOC110953261
Matrix metallopeptidase 14b (membrane-inserted).
  
0.659
mmp15
Matrix metallopeptidase 15b.
  
0.655
LOC110965808
Uncharacterized protein.
     
 0.651
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.