STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pamPeptidylglycine alpha-amidating monooxygenase. (877 aa)    
Predicted Functional Partners:
scg5
Secretogranin V.
   
  
 0.627
ENSAPOP00000024770
Kalirin RhoGEF kinase a.
    
 
 0.601
rassf9
Ras association domain family member 9.
    
 
 0.580
LOC110958715
Trio Rho guanine nucleotide exchange factor a.
    
 
 0.512
LOC110967208
Uncharacterized protein.
    
 
 0.512
LOC110966251
Cytochrome b561.
      
 0.509
tor2a
Torsin family 2, member A.
      
 0.457
cpe
Carboxypeptidase E.
   
  
 0.403
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.