Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSAPOP00000006032Interphotoreceptor matrix proteoglycan 2a. (253 aa)    
Predicted Functional Partners:
ubac1
UBA domain containing 1.
      
 0.562
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
   
  
 0.553
cerkl
Ceramide kinase-like.
      
 0.528
LOC110955275
Si:ch211-25d12.7.
      
 0.489
pcare
Uncharacterized protein.
      
 0.465
ENSAPOP00000030340
Uncharacterized protein.
      
 0.465
ttc8
Tetratricopeptide repeat domain 8.
      
 0.464
rp9
RP9 pre-mRNA splicing factor.
      
 0.428
znf513
Zinc finger protein 513a.
      
 0.426
LOC110970306
Uncharacterized protein.
      
 0.426
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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