Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmod4Tropomodulin 4 (muscle). (342 aa)    
Predicted Functional Partners:
tmod3
Tropomodulin 2.
     
  0.873
tmod1
Tropomodulin 1.
     
  0.873
neb
Nebulin.
   
 0.865
LOC110969593
Scinderin like a.
    
 
 0.848
LOC110963828
Scinderin like b.
    
 
 0.848
flii
FLII actin remodeling protein.
    
 
 0.834
vps72
Vacuolar protein sorting 72 homolog a.
   
 
  0.814
LOC110962066
Uncharacterized protein.
    
 
 0.737
lrrfip2
Leucine rich repeat (in FLII) interacting protein 2.
    
 
 0.737
lmod2
Leiomodin 2 (cardiac) b.
   
 
 0.725
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.