Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110967542Complement 4B (Chido blood group). (1704 aa)    
Predicted Functional Partners:
cfp
Uncharacterized protein.
   
 0.889
LOC110971509
Uncharacterized protein.
   
 0.876
LOC110971507
Uncharacterized protein.
   
 0.876
c9
Complement component 9.
   
 0.854
LOC110959066
Si:ch1073-280e3.1; Belongs to the peptidase S1 family.
   
 0.849
LOC110966866
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.849
C5AR1
Complement C5a receptor 1.
    
 0.842
C1QC
Complement C1q C chain.
   
 0.818
LOC110950641
VWFA domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.811
LOC110946044
Uncharacterized protein.
   
 0.796
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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