Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC110969475Deoxyribonuclease; Belongs to the DNase I family. (287 aa)    
Predicted Functional Partners:
trpm2
Transient receptor potential cation channel, subfamily M, member 2.
     
  0.787
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
     
 0.776
WIPF1
WAS/WASL interacting protein family member 1.
    
   0.764
slc25a21
Solute carrier family 25 member 21; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.760
phf13
PHD finger protein 13.
    
   0.760
tbx20
T-box transcription factor 20.
    
   0.755
spcs2
Signal peptidase complex subunit 2.
    
 
 0.743
spcs1
Signal peptidase complex subunit 1.
    
   0.735
INKA2
Inka box actin regulator 2.
    
   0.732
mib2
Mindbomb E3 ubiquitin protein ligase 2.
     
 0.720
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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