Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110971408Dematin actin binding protein. (377 aa)    
Predicted Functional Partners:
ENSAPOP00000030616
Actin binding LIM protein family, member 2.
    
 0.897
LOC110968936
Adducin 2 (beta).
   
 0.826
add3
Adducin 3 (gamma) a.
   
 0.821
add1
Adducin 1 (alpha).
   
 0.821
LOC110953652
Adducin 3 (gamma) b.
   
 0.821
CDC42
Cell division cycle 42.
     
 0.819
LOC110951271
Cell division cycle 42.
     
 0.819
LOC110959383
Actin binding LIM protein family member 3.
     
  0.808
ablim3
Actin binding LIM protein family, member 3.
     
  0.808
LOC110969864
Rac family small GTPase 2.
     
 0.731
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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