gpr161 protein (Acanthochromis polyacanthus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

gpr161

G protein-coupled receptor 161; Belongs to the G-protein coupled receptor 1 family. (523 aa)

Predicted Functional Partners:

LOC110962897

0.909

prkaca

0.909

LOC110966030

0.909

ENSAPOP00000025798

0.909

LOC110967312

0.899

LOC110963270

0.899

LOC110947388

0.884

ENSAPOP00000011011

0.884

prkar2a

0.850

prkar2b

0.850

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPOP00000011011	LOC110963270	ENSAPOP00000011011	ENSAPOP00000028617	Arrestin, beta 1.	Arrestin_C domain-containing protein.	0.833
ENSAPOP00000011011	LOC110967312	ENSAPOP00000011011	ENSAPOP00000015656	Arrestin, beta 1.	Arrestin_C domain-containing protein.	0.833
ENSAPOP00000011011	gpr161	ENSAPOP00000011011	ENSAPOP00000006239	Arrestin, beta 1.	G protein-coupled receptor 161; Belongs to the G-protein coupled receptor 1 family.	0.884
ENSAPOP00000025798	LOC110962897	ENSAPOP00000025798	ENSAPOP00000002040	Protein kinase, cAMP-dependent, catalytic, beta a; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	0.935
ENSAPOP00000025798	LOC110966030	ENSAPOP00000025798	ENSAPOP00000019012	Protein kinase, cAMP-dependent, catalytic, beta a; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.935
ENSAPOP00000025798	gpr161	ENSAPOP00000025798	ENSAPOP00000006239	Protein kinase, cAMP-dependent, catalytic, beta a; Belongs to the protein kinase superfamily.	G protein-coupled receptor 161; Belongs to the G-protein coupled receptor 1 family.	0.909
ENSAPOP00000025798	prkaca	ENSAPOP00000025798	ENSAPOP00000008116	Protein kinase, cAMP-dependent, catalytic, beta a; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.	0.935
ENSAPOP00000025798	prkar2a	ENSAPOP00000025798	ENSAPOP00000009043	Protein kinase, cAMP-dependent, catalytic, beta a; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, regulatory, type II, alpha, B.	0.981
ENSAPOP00000025798	prkar2b	ENSAPOP00000025798	ENSAPOP00000013083	Protein kinase, cAMP-dependent, catalytic, beta a; Belongs to the protein kinase superfamily.	Protein kinase cAMP-dependent type II regulatory subunit beta.	0.981
LOC110947388	LOC110963270	ENSAPOP00000007273	ENSAPOP00000028617	Arrestin_C domain-containing protein.	Arrestin_C domain-containing protein.	0.833
LOC110947388	LOC110967312	ENSAPOP00000007273	ENSAPOP00000015656	Arrestin_C domain-containing protein.	Arrestin_C domain-containing protein.	0.833
LOC110947388	gpr161	ENSAPOP00000007273	ENSAPOP00000006239	Arrestin_C domain-containing protein.	G protein-coupled receptor 161; Belongs to the G-protein coupled receptor 1 family.	0.884
LOC110962897	ENSAPOP00000025798	ENSAPOP00000002040	ENSAPOP00000025798	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, beta a; Belongs to the protein kinase superfamily.	0.935
LOC110962897	LOC110966030	ENSAPOP00000002040	ENSAPOP00000019012	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.935
LOC110962897	gpr161	ENSAPOP00000002040	ENSAPOP00000006239	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	G protein-coupled receptor 161; Belongs to the G-protein coupled receptor 1 family.	0.909
LOC110962897	prkaca	ENSAPOP00000002040	ENSAPOP00000008116	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.	0.935
LOC110962897	prkar2a	ENSAPOP00000002040	ENSAPOP00000009043	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, regulatory, type II, alpha, B.	0.980
LOC110962897	prkar2b	ENSAPOP00000002040	ENSAPOP00000013083	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Protein kinase cAMP-dependent type II regulatory subunit beta.	0.979
LOC110963270	ENSAPOP00000011011	ENSAPOP00000028617	ENSAPOP00000011011	Arrestin_C domain-containing protein.	Arrestin, beta 1.	0.833
LOC110963270	LOC110947388	ENSAPOP00000028617	ENSAPOP00000007273	Arrestin_C domain-containing protein.	Arrestin_C domain-containing protein.	0.833