Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC110952855Si:ch211-93g23.2. (271 aa)    
Predicted Functional Partners:
sigmar1
Sigma non-opioid intracellular receptor 1.
   
 0.570
LOC110948601
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
    
 0.565
bysl
Bystin-like.
   
 0.561
trmt112
tRNA methyltransferase subunit 11-2.
   
 0.542
ndufs2
NADH:ubiquinone oxidoreductase core subunit S2; Belongs to the complex I 49 kDa subunit family.
    
 0.535
ltv1
LTV1 ribosome biogenesis factor.
   
 0.529
mrps5
Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
 0.527
rps2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 0.527
ndufs3
NADH:ubiquinone oxidoreductase core subunit S3; Belongs to the complex I 30 kDa subunit family.
   
 0.522
anapc2
Anaphase promoting complex subunit 2; Belongs to the cullin family.
    
  0.520
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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