Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000006252Kindlin_2_N domain-containing protein. (65 aa)    
Predicted Functional Partners:
fblim1
Filamin binding LIM protein 1.
    
 0.975
LOC110961789
Uncharacterized protein.
   
 
 0.902
ILK
Integrin linked kinase.
   
 
 0.902
itgb6
Integrin beta; Belongs to the integrin beta chain family.
   
 0.846
fermt3
Fermitin family member 3b.
    
   0.844
LOC110971452
Integrin beta.
   
 0.837
LOC110949437
LIM domain-containing protein.
   
 
 0.829
LOC110964386
LIM domain-containing protein.
   
 
 0.829
parvb
Parvin, beta.
   
 
 0.826
parva
Parvin, alpha a.
   
 
 0.826
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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