STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110958575Ribosomal protein S6 kinase. (727 aa)    
Predicted Functional Partners:
LOC110956697
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
0.951
LOC110969591
TSC complex subunit 1b.
    
 0.923
mapk1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
0.921
MAPK1
Mitogen-activated protein kinase.
   
0.921
LOC110945879
Mitogen-activated protein kinase.
   
0.921
LOC110958564
TBC1 domain family, member 7.
     
 0.904
rint1
RAD50 interactor 1.
    
 0.901
LOC110964677
Activating transcription factor 4b.
     
 0.896
stx18
Syntaxin 18.
    
 0.894
use1
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
    
 0.893
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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