CPLX1 protein (Acanthochromis polyacanthus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

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[Homology]

Score

CPLX1

Complexin 1. (133 aa)

Predicted Functional Partners:

LOC110967147

0.945

cplx4

0.912

LOC110961584

0.901

cplx2

0.901

ENSAPOP00000032510

0.836

ENSAPOP00000020185

0.818

ENSAPOP00000020400

0.818

ENSAPOP00000023990

0.818

snap25

0.814

LOC110966481

0.814

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPLX1	ENSAPOP00000020185	ENSAPOP00000006281	ENSAPOP00000020185	Complexin 1.	Uncharacterized protein.	0.818
CPLX1	ENSAPOP00000020400	ENSAPOP00000006281	ENSAPOP00000020400	Complexin 1.	annotation not available	0.818
CPLX1	ENSAPOP00000023990	ENSAPOP00000006281	ENSAPOP00000023990	Complexin 1.	annotation not available	0.818
CPLX1	ENSAPOP00000032510	ENSAPOP00000006281	ENSAPOP00000032510	Complexin 1.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.836
CPLX1	LOC110961584	ENSAPOP00000006281	ENSAPOP00000007977	Complexin 1.	Complexin 2, like.	0.901
CPLX1	LOC110966481	ENSAPOP00000006281	ENSAPOP00000023377	Complexin 1.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.814
CPLX1	LOC110967147	ENSAPOP00000006281	ENSAPOP00000002970	Complexin 1.	Complexin 3b.	0.945
CPLX1	cplx2	ENSAPOP00000006281	ENSAPOP00000008453	Complexin 1.	Complexin 2.	0.901
CPLX1	cplx4	ENSAPOP00000006281	ENSAPOP00000015564	Complexin 1.	Complexin 4a.	0.912
CPLX1	snap25	ENSAPOP00000006281	ENSAPOP00000014548	Complexin 1.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.814
ENSAPOP00000020185	CPLX1	ENSAPOP00000020185	ENSAPOP00000006281	Uncharacterized protein.	Complexin 1.	0.818
ENSAPOP00000020185	LOC110961584	ENSAPOP00000020185	ENSAPOP00000007977	Uncharacterized protein.	Complexin 2, like.	0.672
ENSAPOP00000020185	LOC110967147	ENSAPOP00000020185	ENSAPOP00000002970	Uncharacterized protein.	Complexin 3b.	0.840
ENSAPOP00000020185	cplx2	ENSAPOP00000020185	ENSAPOP00000008453	Uncharacterized protein.	Complexin 2.	0.840
ENSAPOP00000020400	CPLX1	ENSAPOP00000020400	ENSAPOP00000006281	annotation not available	Complexin 1.	0.818
ENSAPOP00000020400	LOC110961584	ENSAPOP00000020400	ENSAPOP00000007977	annotation not available	Complexin 2, like.	0.672
ENSAPOP00000020400	LOC110967147	ENSAPOP00000020400	ENSAPOP00000002970	annotation not available	Complexin 3b.	0.840
ENSAPOP00000020400	cplx2	ENSAPOP00000020400	ENSAPOP00000008453	annotation not available	Complexin 2.	0.840
ENSAPOP00000023990	CPLX1	ENSAPOP00000023990	ENSAPOP00000006281	annotation not available	Complexin 1.	0.818
ENSAPOP00000023990	LOC110961584	ENSAPOP00000023990	ENSAPOP00000007977	annotation not available	Complexin 2, like.	0.672