Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000006337Uncharacterized protein. (146 aa)    
Predicted Functional Partners:
hnrnpc
RRM domain-containing protein.
   
  0.937
ENSAPOP00000017443
RRM domain-containing protein.
   
  0.937
LOC110968957
Heterogeneous nuclear ribonucleoprotein M.
   
 0.883
LOC110959966
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.839
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.839
rbmx
RNA binding motif protein X-linked.
   
 0.814
eif4a3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.780
cirbp
Cold inducible RNA binding protein b.
   
 0.777
ENSAPOP00000007549
Uncharacterized protein.
   
 0.722
ENSAPOP00000007975
annotation not available
   
 0.722
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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