STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000006337Uncharacterized protein. (146 aa)    
Predicted Functional Partners:
LOC110968957
Heterogeneous nuclear ribonucleoprotein M.
   
 0.872
hnrnpc
RRM domain-containing protein.
   
0.853
ENSAPOP00000017443
RRM domain-containing protein.
   
 0.853
rbmx
RNA binding motif protein X-linked.
   
 0.839
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.792
LOC110959966
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.774
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.774
sf3b1
Splicing factor 3b, subunit 1.
   
 0.754
sf3b2
Splicing factor 3b, subunit 2.
   
 0.740
cirbp
Cold inducible RNA binding protein b.
   
 0.734
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.