STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d1TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1. (1407 aa)    
Predicted Functional Partners:
rab2a
RAB2A, member RAS oncogene family.
    
 0.869
rab14
RAB14, member RAS oncogene family.
    
 0.856
LOC110969016
Uncharacterized protein.
    
 0.856
prkaa1
Non-specific serine/threonine protein kinase.
     
 0.782
prkaa2
Non-specific serine/threonine protein kinase.
     
 0.782
LOC110968494
RAB11a, member RAS oncogene family.
    
 0.763
LOC110950716
Uncharacterized protein.
    
 0.763
LOC110954587
RAB11a, member RAS oncogene family, like.
    
 0.763
ENSAPOP00000031699
Uncharacterized protein.
    
 0.763
ENSAPOP00000021955
Uncharacterized protein.
    
 0.724
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.