Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110972147ADAM metallopeptidase with thrombospondin type 1 motif, 18. (467 aa)    
Predicted Functional Partners:
ENSAPOP00000033582
Uncharacterized protein.
 
     0.810
adamtsl5
ADAMTS like 5.
 
   
 0.662
sall4
Spalt-like transcription factor 4.
      
 0.646
thsd1
Thrombospondin, type I, domain containing 1.
     
 0.639
LOC110961616
Signal peptide, CUB domain, EGF-like 3.
   
 0.594
pofut2
Protein O-fucosyltransferase 2.
     
 0.592
selenos
Selenoprotein S.
      
 0.590
ush1c
Usher syndrome 1C.
      
 0.589
LOC110956819
Signal peptide, CUB domain, EGF-like 2.
   
 0.581
LOC110964408
Signal peptide, CUB domain, EGF-like 1.
   
 0.581
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.