Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110950451Tyrosine-protein kinase. (506 aa)    
Predicted Functional Partners:
LOC110958581
SH2 domain containing 1A duplicate b.
   
 0.975
ENSAPOP00000012901
Uncharacterized protein.
   
 0.925
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.919
ptprc
Protein tyrosine phosphatase receptor type C.
   
 0.913
pdgfrb
Platelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
    
  0.913
LOC110967665
Uncharacterized protein.
    
 0.898
LOC110948964
Signal transducing adaptor family member 2a.
    
 0.898
cbl
Cbl proto-oncogene, E3 ubiquitin protein ligase.
    
 0.898
LOC110953831
Cbl proto-oncogene C, E3 ubiquitin protein ligase.
    
 0.898
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.894
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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