Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
a1cfApobec1 complementation factor. (610 aa)    
Predicted Functional Partners:
eprs1
Glutamyl-prolyl-tRNA synthetase.
   
 
 0.806
LOC110959966
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.798
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.798
psmg2
Zgc:136493.
    
   0.782
ENSAPOP00000008716
Uncharacterized protein.
     
 0.781
LOC110949615
Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2b.
     
 0.781
psmg3
Proteasome (prosome, macropain) assembly chaperone 3.
    
   0.766
hnrnpc
RRM domain-containing protein.
   
 0.716
ENSAPOP00000017443
RRM domain-containing protein.
   
 0.716
LOC110961296
RRM domain-containing protein.
   
 0.712
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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