Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC110961054Olfactomedin-like domain-containing protein. (440 aa)    
Predicted Functional Partners:
chga
Chromogranin A.
      
 0.669
lrig1
Leucine-rich repeats and immunoglobulin-like domains 1.
    
 
 0.669
mex3a
RING-type domain-containing protein.
    
 
 0.656
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
    
 
 0.568
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 
 0.568
pcgf2
Polycomb group ring finger 2.
      
 0.520
ENSAPOP00000018748
Bmi1 polycomb ring finger oncogene 1a.
      
 0.520
NOG
Noggin; Belongs to the noggin family.
      
 0.492
LOC110948481
Noggin; Belongs to the noggin family.
      
 0.492
LOC110963201
Forkhead box L1.
      
 0.490
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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